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        string(33372) "<document><p class="totem_indent">
	Gerardo Pepe</p>
<p class="totem_indent">
	Bioinformatico / Biostatistico&nbsp;</p>
<p>
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Articoli pubblicati: 8 / Scopus h-index: 4 / # Citazioni: 67</p>
<p>
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;via Giulio Tesauro, 67 Salerno (SA)</p>
<p>
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;+39 3881604796</p>
<p class="totem_indent">
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;gerardopepe0@gmail.com&nbsp;/gerardo.pepe@uniroma2.it</p>
<p class="totem_indent">
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;07/12/1988</p>
<p class="totem_indent">
	&nbsp;</p>
<p>
	&nbsp;</p>
<p>
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Formazione</p>
<p>
	2017 - 2020&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;PhD in Biologia Cellulare e Molecolare (BCM)</p>
<p class="totem_indent">
	Titolo: Identification of genomics signatures of drug response and tumorigenesis.</p>
<p class="totem_indent">
	Universit&agrave; di Roma Tor Vergata</p>
<p>
	2015 - 2017&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Laurea Magistrale in Bioinformatica (LM6)&nbsp;</p>
<p class="totem_indent">
	110/110&nbsp;cum laude</p>
<p class="totem_indent">
	Titolo: Systematic identification of informative genes for an improved prediction and interpretation of drug response mechanisms in cancer cell lines.</p>
<p>
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Universit&agrave; di Roma Tor Vergata</p>
<p>
	2015&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Laurea Triennale in Scienze Biologiche (L13)&nbsp;&nbsp;&nbsp;</p>
<p>
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Titolo: RT-PCR validation of putative sex-specific transcripts in&nbsp;</p>
<p>
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Phlebotomus pernicious&nbsp;adult stage.</p>
<p>
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Universit&agrave; di Naploli, Federico II&nbsp;</p>
<p>
	&nbsp;</p>
<p>
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Posizioni ricoperte&nbsp;</p>
<p class="totem_indent">
	dal 2023&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Ricercatore, RTDa</p>
<p class="totem_indent">
	Methods for comparison and integrative analysis of healthy and control patients to develop targeted RNA based therapies.&nbsp;&nbsp;</p>
<p class="totem_indent">
	Universit&agrave; di Roma Tor Vergata</p>
<p class="totem_indent">
	dal 2021&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Review Editor: Frontiers in Molecular Biosciences - Protein and RNA Networks.&nbsp;</p>
<p class="totem_indent">
	dal 2020 al 2023&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Post-doc, lab prof. Manuela Helmer-Citterich&nbsp;</p>
<p class="totem_indent">
	Discovery and perturbation of pathogenic variations in the kinase network regulating cancer-associated super-enhancers.</p>
<p class="totem_indent">
	Universit&agrave; di Roma Tor Vergata</p>
<p>
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Premi</p>
<p>
	2022&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Contributo premiale per ricercatori ed assegnisti di ricerca</p>
<p>
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Regione Lazio</p>
<p>
	tutto quanto corrisponde a verit&agrave;, ai sensi degli articoli 46 e 47 del D.P.R. 445 del 2000</p>
<p>
	&nbsp;</p>
<p>
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Insegnamento</p>
<p class="totem_indent">
	dal 2022&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Modulo di Bioinformatica nel CI Bioinformatica e Genetica Medica &ndash; 6 CFU, corso fondamentale&nbsp;</p>
<p class="totem_indent">
	Laurea triennale in Scienze Biologiche</p>
<p class="totem_indent">
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Universit&agrave; di Roma Tor Vergata</p>
<p class="totem_indent">
	dal 2021&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Corso&nbsp;Biological Networks &ndash; 2 CFU, AAS</p>
<p class="totem_indent">
	Laurea magistrale in Bioinformatica</p>
<p class="totem_indent">
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Universit&agrave; di Roma Tor Vergata</p>
<p>
	dal 2019&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Relatore di 3 tesi Magistrali in Bioinformatica.</p>
<p class="totem_indent">
	dal 2018&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Co-relatore di 7 tesi Magistrali in Bioinformatica.</p>
<p>
	dal 2017&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Co-relatore di 14 tesi Triennali in Scienze Biologiche e Biotecnologie.</p>
<p class="totem_indent">
	dal 2017&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Tutor e membro di Commissione d&rsquo;esame per il Corso di Biologia Molecolare per la laurea triennale in Scienze Biologiche.</p>
<p class="totem_indent">
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Universit&agrave; di Roma Tor Vergata</p>
<p class="totem_indent">
	dal 2017&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Tutor e membro di Commissione d&rsquo;esame per il Corso di Bioinformatica per la laurea triennale in Scienze Biologiche.</p>
<p class="totem_indent">
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Universit&agrave; di Roma Tor Vergata</p>
<p>
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Background accademico / Esperienze&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</p>
<p>
	2021&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;GTN Sm&ouml;rg&aring;sbord: A Global Galaxy Course&nbsp;&ndash; Corso online</p>
<p class="totem_indent">
	RNA-Seq analysis, Single-cell RNA seq analysis, Proteomics Galaxy Training Network (GTN)</p>
<p class="totem_indent">
	2021&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Winter school 2021: &lsquo;Bioinformatics for discovery in structural and functional biology&rsquo; &ndash; Corso online</p>
<p class="totem_indent">
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Dipartimento di Farmacia e Biotecnologia dell&rsquo;Universit&agrave; di Bologna</p>
<p class="totem_indent">
	2021&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Advanced Training Course in &lsquo;Data mining in Aquaculture and Biomedicine&rsquo; &ndash; Corso online</p>
<p class="totem_indent">
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Dipartimento di Biologia dell&rsquo;Universit&agrave; di Roma Tor Vergata</p>
<p class="totem_indent">
	2019&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;2nd International Workshop in cancer genomics</p>
<p class="totem_indent">
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;IRE, Regina Elena, Roma</p>
<p class="totem_indent">
	2019&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;2nd U-PGx personalized medicine (Pharmacogenomics into the clinic, cancer genomics)</p>
<p class="totem_indent">
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Universit&agrave; di Roma Tor Vergata</p>
<p class="totem_indent">
	2019&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;DeepLearn 2019 (data clustering, deep learning in medicine, feature extraction, big data and statistical inference, knowledge discovery from complex data)</p>
<p class="totem_indent">
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Varsavia, Global Expo</p>
<p class="totem_indent">
	2016&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;RNA-seq data analysis workshop (NGS data processing,&nbsp;de novo&nbsp;transcriptome assembly and analysis)</p>
<p class="totem_indent">
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Universit&agrave; di Napoli, Federico II&nbsp;</p>
<p>
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Lingue</p>
<p>
	Inglese&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Avanzato (B2)</p>
<p>
	Italiano&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Madrelingua</p>
<p>
	&nbsp;</p>
<p>
	tutto quanto corrisponde a verit&agrave;, ai sensi degli articoli 46 e 47 del D.P.R. 445 del 2000</p>
<p>
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Abilit&agrave; tecniche</p>
<p class="totem_indent">
	Linguaggi di programmazione: Python, Pandas, Sklearn, Seaborn (Clustermap, Heatmap), Bash, R, C, Ruby, MySQL, HTML, CSS, PHP.&nbsp;</p>
<p class="totem_indent">
	Conoscenze computazionali:&nbsp;</p>
<p class="totem_indent">
	HPC (High performance cluster), Galaxy, Big data manipulation and analysis, Feature selection, Machine learning (Elastic Net, Random Forest, SVR), Deep learning, NGS analysis, RNA-seq data analysis, Variant calling, Chip-seq analysis, biological networks analysis and comparison, R/Bioconductor&nbsp;</p>
<p class="totem_indent">
	Esperienze sperimentali:&nbsp;</p>
<p class="totem_indent">
	PCR, RT-PCR, PCR real-time, DNA and RNA extraction, DNA cloning, Electrophoretic mobility shift assay, DNA sequencing, Plasmid miniprep&nbsp;</p>
<p class="totem_indent">
	Sistemi operativi:&nbsp;</p>
<p class="totem_indent">
	Linux, Windows, macOS</p>
<p class="totem_indent">
	Altro:</p>
<p class="totem_indent">
	Sviluppatore di applicazioni web per la bioinformatica</p>
<p>
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Conferenze&nbsp;</p>
<p class="totem_indent">
	2022&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;3D-BioInfo Annual General Meeting</p>
<p class="totem_indent">
	Selected Talk: Identification of RNA modules in human lncRNAs</p>
<p class="totem_indent">
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Wellcome Genome Campus, Hinxton, Regno Unito</p>
<p class="totem_indent">
	2022&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Annual conference of the Bioinformatics Italian Society (BITS) 2022</p>
<p class="totem_indent">
	Selected Talk: Identification of RNA modules in human lncRNAs&nbsp;</p>
<p class="totem_indent">
	Polo Santa Marta, Verona</p>
<p>
	2022&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;BEST HACKATHON 2022 &ndash; Invited Speaker</p>
<p class="totem_indent">
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;DNA, Big Data &amp; Informatics</p>
<p class="totem_indent">
	Macroarea di Ingegneria - Universit&agrave; di Roma Tor Vergata</p>
<p class="totem_indent">
	2021&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;3D-Bioinfo Annual General meeting</p>
<p class="totem_indent">
	Selected Talk: &ldquo;Interactions RNA-RNA binding proteins&rdquo;</p>
<p class="totem_indent">
	Conferenza online</p>
<p class="totem_indent">
	2021&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Annual conference of the Bioinformatics Italian Society (BITS) 2021</p>
<p class="totem_indent">
	Selected Talk: &ldquo;Variation in the co-expression profile highlights the loss of miRNA-mRNA regulation in several cancers&rdquo;</p>
<p class="totem_indent">
	Conferenza online</p>
<p class="totem_indent">
	2018&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Annual conference of the Bioinformatics Italian Society (BITS) 2018</p>
<p class="totem_indent">
	Abstract: &ldquo;Systematic identification of informative genes for an improved prediction and interpretation of drug response mechanisms in cancer cell lines&rdquo;</p>
<p>
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Universit&agrave; di Torino</p>
<p>
	&nbsp;</p>
<p>
	tutto quanto corrisponde a verit&agrave;, ai sensi degli articoli 46 e 47 del D.P.R. 445 del 2000</p>
<p>
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Publicazioni</p>
<p>
	1.&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Pepe, G., Appierdo, R., Carrino, C., Ballesio, F.,&nbsp;Helmer-Citterich, M. and Gherardini, P.F. (2022) Artificial intelligence methods enhance the discovery of RNA interactions. Frontiers in Molecular Biosciences, 1113.</p>
<p>
	Scopus Citations: - /&nbsp;Journal Impact Factor:&nbsp;6.113&nbsp;&nbsp;</p>
<p>
	2.&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Pepe, G., Carrino, C., Parca, L. and Helmer-Citterich, M. (2022)</p>
<p>
	Dissecting the genome for drug response prediction. Methods in molecular biology.&nbsp;</p>
<p>
	Data Mining Thecniques for the Life Sciences, 187-196.</p>
<p>
	Scopus Citations: - /&nbsp;Journal Impact Factor:&nbsp;1.37</p>
<p>
	3.&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Pepe, G., Parca, L., Viviani, L., Ausiello, G., and Helmer-Citterich, M. (2022a).&nbsp;Variation in the co-expression profile highlights a loss of miRNA-mRNA regulation in multiple cancer types.&nbsp;Non-Coding RNA Research&nbsp;7, 98&ndash;105.</p>
<p>
	Scopus Citations: 1 /&nbsp;Journal Impact Factor:&nbsp;5.978&nbsp;&nbsp;</p>
<p>
	4.&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Pepe, G., Guarracino, A., Ballesio, F., Parca, L., Ausiello, G., and Helmer-Citterich, M. (2022).&nbsp;Evaluation of potential miRNA sponge effects of SARS genomes in human.&nbsp;Non-Coding RNA Research 7, 48&ndash;53.</p>
<p>
	Scopus Citations: 4 /&nbsp;Journal Impact Factor:&nbsp;5.978&nbsp;&nbsp;</p>
<p class="totem_indent">
	5.&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;PDBe-KB consortium (2022). PDBe-KB: collaboratively defining the biological context of structural data.&nbsp;Nucleic Acids Res.&nbsp;50, D534&ndash;D542.</p>
<p>
	Scopus Citations: 16 /&nbsp;Journal Impact Factor:&nbsp;19.160&nbsp;&nbsp;</p>
<p>
	6.&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Novelli, G., Liu, J., Biancolella, M., Alonzi, T., Novelli, A., Patten, J.J., Cocciadiferro, D., Agolini, E., Colona, V.L., Rizzacasa, B., et al.&nbsp;(2021). Inhibition of HECT E3 ligases as potential therapy for COVID-19.&nbsp;Cell Death Dis.&nbsp;12, 310.</p>
<p>
	Scopus Citations: 20 /&nbsp;Journal Impact Factor:&nbsp;9.685&nbsp;&nbsp;</p>
<p>
	7.&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Guarracino&nbsp;A.,&nbsp;Pepe*&nbsp;G.,&nbsp;Ballesio F.,&nbsp;Adinolfi M.,&nbsp;Pietrosanto M.,&nbsp;Sangiovanni E.,&nbsp;Vitale I.,&nbsp;Ausiello G.,&nbsp;Helmer-Citterich M.&nbsp;BRIO: a web server for RNA sequence and structure motif scan.&nbsp;Nucleic Acids Res.2021;&nbsp;49:&nbsp;W67&ndash;W71.</p>
<p>
	Scopus Citations: 3 /&nbsp;Journal Impact Factor:&nbsp;19.160&nbsp;&nbsp;</p>
<p class="totem_indent">
	8.&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Parca, L., Pepe*, G., Pietrosanto, M., Galvan, G., Galli, L., Palmeri, A., Sciandrone, M., Ferr&egrave;, F., Ausiello, G., and Helmer-Citterich, M. (2019).&nbsp;Modeling cancer drug response through drug-specific informative genes. Sci. Rep.&nbsp;9, 15222.</p>
<p>
	Scopus Citations: 23 /&nbsp;Journal Impact Factor:&nbsp;4.996</p>
<p class="totem_indent">
	&nbsp;</p>
<p class="totem_indent">
	*co-primo autore</p>
<p>
	&nbsp;</p>
<p>
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Altre info ed interessi</p>
<p class="totem_indent">
	Interessi&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Programmazione, Statistica, Data analysis, NGS, articoli scientifici, viaggiare, cucinare, cinema, e letteratura.&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</p>
<p>
	Patente di guida&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;A, B&nbsp;</p>
<p>
	&nbsp;</p>
<p>
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Privacy</p>
<p class="totem_indent">
	Autorizzo al trattamento dei miei dati personali ai sensi del Decreto Legislativo Italiano n. 196/2003 Regolazione (EU) GDPR n.679/2016.&nbsp;&nbsp;&nbsp;</p>
<p class="totem_indent">
	&nbsp;</p>
<p>
	tutto quanto corrisponde a verit&agrave;, ai sensi degli articoli 46 e 47 del D.P.R. 445 del 2000</p></document><document><p>
	&nbsp; &nbsp;</p>
<p>
	2017 - 2020</p>
<p>
	2015 - 2017</p>
<p>
	2015</p>
<p>
	2023 &ndash; now 2020 - 2023</p>
<p>
	2022 - now 2021 - now</p>
<p>
	2019 - now 2018 - now 2017 - now 2017 - now</p>
<p>
	2017 - now</p>
<p>
	Gerardo Pepe&nbsp;Bioinformatician / Biostatician</p>
<p>
	Via Taurano, 40 Pagani (SA) +39 3881604796</p>
<p>
	gerardopepe0@gmail.com&nbsp;/gerardo.pepe@uniroma2.it&nbsp;07/12/1988</p>
<p>
	Education</p>
<p>
	PhD in Cellular and Molecular Biology (BCM)</p>
<p>
	Dissertation: Identification of genomics signatures of drug response and tumorigenesis.&nbsp;Tor Vergata University of Rome</p>
<p>
	Master&rsquo;s degree in bioinformatics (LM6)&nbsp;110/110&nbsp;cum laude&nbsp;Dissertation: Systematic identification of informative genes for an improved prediction and interpretation of drug response mechanisms in cancer cell lines.</p>
<p>
	Tor Vergata University of Rome</p>
<p>
	Bachelor&rsquo;s degree in Biological Science (L13)</p>
<p>
	Dissertation: RT-PCR validation of putative sex-specific transcripts in&nbsp;Phlebotomus pernicious&nbsp;adult stage.&nbsp;Federico II University, Naples</p>
<p>
	Positions held</p>
<p>
	Researcher RTD-a Dept. Biology Development of gene therapy and RNA-based drug technology&nbsp;Tor Vergata University of Rome</p>
<p>
	Post-doc, lab of prof. Manuela Helmer-Citterich Discovery and perturbation of pathogenic variations in the kinase network regulating cancer-associated super-enhancers.&nbsp;Tor Vergata University of Rome</p>
<p>
	Teaching experience</p>
<p>
	Professor of Bioinformatics &ndash; 6CFU Bachelor degree theses in Biological Sciences</p>
<p>
	Tor Vergata University of Rome</p>
<p>
	Professor of Biological Networks &ndash; AAS 2CFU Master Degree in Bioinformatics</p>
<p>
	Tor Vergata University of Rome</p>
<p>
	Supervisor of 2 Master Degree theses in Bioinformatics.&nbsp;Co-supervisor of Master Degree theses in Bioinformatics and Biotechnology.&nbsp;Co-supervisor of 11 Bachelor degree theses in Biological Sciences.</p>
<p>
	Tutor for the Molecular Biology course in the Degree in Biological Sciences.</p>
<p>
	Tor Vergata University of Rome</p>
<p>
	Tutor for Bioinformatics course in the Degree in Biological Sciences.</p>
<p>
	Tor Vergata University of Rome</p>
<p>
	&nbsp;</p>
<p>
	ai sensi degli art. 46 e 47 del D.P.R. n. 445 del 2000</p>
<p>
	Academic background / Experience</p>
<p>
	2021&nbsp;Review Editor: Frontiers in Molecular Biosciences - Protein and RNA Networks.</p>
<p>
	2021&nbsp;GTN Smo?rga?sbord: A Global Galaxy Course RNA-Seq analysis, Single-cell RNA seq analysis, Proteomics</p>
<p>
	2021&nbsp;Winter school 2021: &lsquo;Bioinformatics for discovery in structural and functional biology&rsquo;</p>
<p>
	2021&nbsp;Advanced Training Course in &lsquo;Data mining in Aquaculture and Biomedicine&rsquo;</p>
<p>
	2019&nbsp;2nd International Workshop in cancer genomics</p>
<p>
	IRE, Regina Elena, Rome</p>
<p>
	2019&nbsp;2nd U-PGx personalized medicine (Pharmacogenomics into the clinic, cancer genomics)</p>
<p>
	Tor Vergata University of Rome</p>
<p>
	2019&nbsp;DeepLearn 2019 (data clustering, deep learning in medicine, feature extraction, big data and statistical inference, knowledge discovery</p>
<p>
	from complex data)</p>
<p>
	Warsaw, Global Expo</p>
<p>
	2016&nbsp;RNA-seq data analysis workshop (NGS data processing, de novo transcriptome assembly and analysis)</p>
<p>
	Federico II University, Naples</p>
<p>
	Languages</p>
<p>
	English Advanced (B2) Italian Mother tongue</p>
<p>
	Tecnical skills&nbsp;Programming languages:&nbsp;Python, Pandas, Sklearn, Seaborn (Clustermap, Heatmap), Bash, R, C, Ruby, MySQL, HTML, CSS, PHP.&nbsp;Computational and theoretical knowledge:&nbsp;HPC (High performance cluster), Galaxy, Big data manipulation and analysis, Feature selection, Machine learning (Elastic Net, Random Forest, SVR), Deep learning, NGS analysis, RNA-seq data analysis, Variant calling, Chip-seq analysis, Biological networks analysis and comparison, R/Bioconductor&nbsp;Experimental experience:&nbsp;PCR, RT-PCR, PCR real-time, DNA and RNA extraction, DNA cloning, Electrophoretic mobility shift assay, DNA sequencing, Plasmid miniprep&nbsp;Operating system:&nbsp;Linux, Windows, macOS&nbsp;Others:&nbsp;Web application for bioinformatics developer</p>
<p>
	&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</p>
<p>
	ai sensi degli art. 46 e 47 del D.P.R. n. 445 del 2000</p>
<p>
	Conferences</p>
<p>
	2023&nbsp;SIBBM 2023 &ndash; Abstract A Feature-based Meta-analysis Approach to Unravel the</p>
<p>
	Pathophysiological Landscape of Autoimmune Diseases&nbsp;2023&nbsp;BITS 2023 &ndash; Abstract</p>
<p>
	A Feature-based Meta-analysis Approach to Unravel the Pathophysiological Landscape of Autoimmune Diseases</p>
<p>
	2022&nbsp;3D-BioInfo &ndash; Selected Talk Identification of RNA modules in human lncRNAs</p>
<p>
	2022&nbsp;BITS 2022 - Selected Talk</p>
<p>
	Identification of RNA modules in human lncRNAs</p>
<p>
	2022&nbsp;BEST HACK 22 &ndash; Invited Speaker DNA, Big Data &amp; Informatics</p>
<p>
	2021&nbsp;3D-Bioinfo Annual meeting - Selected Talk Interactions RNA-RNA binding proteins</p>
<p>
	2021&nbsp;BITS 2021 - Selected Talk Variation in the co-expression profile highlight the loss of miRNA-</p>
<p>
	mRNA regulation in several cancers</p>
<p>
	2018&nbsp;BITS 2018 - Abstract Systematic identification of informative genes for an improved</p>
<p>
	prediction and interpretation of drug response mechanisms in cancer cell lines.</p>
<p>
	Publications</p>
<ol>
	<li>
		<p>
			Clinical and functional characterization of COL2A1 p.Gly444Ser variant: From a fetal phenotype to a previously undisclosed postnatal phenotype (2023). Bone Reports 19, 101728.</p>
	</li>
	<li>
		<p>
			Pericoli, G., Galardi, A., Paolini, A., Petrilli, L.L., Pepe, G., Palma, A., Colletti, M., Ferretti, R., Giorda, E., Levi Mortera, S., et al. (2023). Inhibition of exosome biogenesis affects cell motility in heterogeneous sub-populations of paediatric-type diffuse high-grade gliomas. Cell Biosci. 13, 207.</p>
	</li>
	<li>
		<p>
			Cirotti, C., Taddei, I., Contadini, C., Di Girolamo, C., Pepe, G., De Bardi, M., Borsellino, G., Helmer-Citterich, M., and Barila?, D. (2024). NRF2 connects Src tyrosine kinase to ferroptosis resistance in glioblastoma. Life Sci Alliance 7. 10.26508/lsa.202302205.</p>
	</li>
	<li>
		<p>
			Ballarino, M., Pepe, G., Helmer-Citterich, M., Palma, A. Exploring the landscape of tools and resources for the analysis of long non-coding RNAs.&nbsp;Computational and Structural Biotechnology Journal</p>
	</li>
	<li>
		<p>
			Olmi, L., Pepe, G., Helmer-Citterich, M., Canini, A., Gismondi, A.</p>
		<p>
			Looking for Plant microRNAs in Human Blood Samples: Bioinformatics Evidence and</p>
		<p>
			Perspectives. Plant Foods for Human Nutrition, 1-8</p>
	</li>
	<li>
		<p>
			Pepe, G., Appierdo, R., Carrino, C., Ballesio, F.,&nbsp;Helmer-Citterich, M. and Gherardini, P.F.</p>
		<p>
			Artificial intelligence methods enhance the discovery of RNA interactions. Frontiers in</p>
		<p>
			Molecular Biosciences, 1113.</p>
	</li>
	<li>
		<p>
			Pepe, G., Carrino, C., Parca, L. and Helmer-Citterich, M.</p>
		<p>
			Dissecting the genome for drug response prediction. Data Mining Thecniques for the Life Sciences, 187-196.</p>
	</li>
</ol>
<p>
	&nbsp;</p>
<ol>
	<li>
		<p>
			Pepe, G., Parca, L., Viviani, L., Ausiello, G., and Helmer-Citterich, M. (2022a). Variation in the co-expression profile highlights a loss of miRNA-mRNA regulation in multiple cancer types. Non-Coding RNA Research&nbsp;7, 98&ndash;105.</p>
	</li>
	<li>
		<p>
			Pepe, G., Guarracino, A., Ballesio, F., Parca, L., Ausiello, G., and Helmer-Citterich, M. (2022). Evaluation of potential miRNA sponge effects of SARS genomes in human. Non- Coding RNA Research 7, 48&ndash;53.</p>
	</li>
	<li>
		<p>
			PDBe-KB consortium (2022). PDBe-KB: collaboratively defining the biological context of structural data. Nucleic Acids Res.&nbsp;50, D534&ndash;D542.</p>
	</li>
	<li>
		<p>
			Novelli, G., Liu, J., Biancolella, M., Alonzi, T., Novelli, A., Patten, J.J., Cocciadiferro, D., Agolini, E., Colona, V.L., Rizzacasa, B., et al. (2021). Inhibition of HECT E3 ligases as potential therapy for COVID-19. Cell Death Dis.&nbsp;12, 310.</p>
	</li>
	<li>
		<p>
			Guarracino A., Pepe*&nbsp;G., Ballesio F., Adinolfi M., Pietrosanto M., Sangiovanni E., Vitale I., Ausiello G., Helmer-Citterich M. BRIO: a web server for RNA sequence and structure motif scan.&nbsp;Nucleic Acids Res.&nbsp;2021; 49:W67&ndash;W71.</p>
	</li>
	<li>
		<p>
			Parca, L., Pepe*, G., Pietrosanto, M., Galvan, G., Galli, L., Palmeri, A., Sciandrone, M., Ferre?, F., Ausiello, G., and Helmer-Citterich, M. (2019). Modeling cancer drug response through drug-specific informative genes. Sci. Rep.&nbsp;9, 15222.</p>
	</li>
</ol>
<p>
	*co-first author</p>
<p>
	Interest Driving licence</p>
<p>
	Other information &amp; interest</p>
<p>
	Programming, Statistics, Data analysis, NGS, Scientific readings, travelling, cooking, cinema, and literature.</p>
<p>
	A, B</p>
<p>
	Privacy</p>
<p>
	I hereby authorize the treatment of my personal data according to Italian Legislative Decree n. 196/2003 Regulation (EU) GDPR n.679/2016.</p>
<p>
	&nbsp;&nbsp;&nbsp;</p>
<p>
	ai sensi degli art. 46 e 47 del D.P.R. n. 445 del 2000</p></document> a:0:{}"
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